BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003F08LP1|AL425157
(1014 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1638 1820 0.0
>3x_Contig1638
Length = 14042
Score = 1820 bits (904), Expect = 0.0
Identities = 985/1020 (96%), Gaps = 6/1020 (0%)
Strand = Plus / Plus
Query: 1 gatcacatatatcagattcgacaaagctttcagggttcaaggtatcgataaatcaacctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5498 gatcacatatatcagattcgacaaagctttcagggttcaaggtatcgataaatcaacctt 5557
Query: 61 ggcttaccaatcgcctttgcvaccatatggagcttggttctccttattcttttgcatttt 120
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 5558 ggcttaccaatcgcctttgcaaccatatggagcttggttctccttattcttttgcatttt 5617
Query: 121 gatcggtttgatcaaraacttccctgcattcttaggtgacaccttcgactacragtcatt 180
||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 5618 gatcggtttgatcaaaaacttccctgcattcttaggtgacaccttcgactacaagtcatt 5677
Query: 181 catcactggttacattggtatcccaacttacatcatctcatacatcggttacraattgtg 240
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 5678 catcactggttacattggtatcccaacttacatcatctcatacatcggttacaaattgtg 5737
Query: 241 gtacaagaccaagatcatcccatccgaagaagttgatctcgtctcattcvragaagcagt 300
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 5738 gtacaagaccaagatcatcccatccgaagaagttgatctcgtctcattcaaagaagcagt 5797
Query: 301 cgatttggragargaagaaggtaaaatgttagatgaggaaagagctgcacatcttgcagc 360
|||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5798 cgatttggaagaagaagaaggtaaaatgttagatgaggaaagagctgcacatcttgcagc 5857
Query: 361 acacggraagggtctcaaatggtgctacgaraaggtcttcggctgggtcatgtgaggcgg 420
|||||| |||| |||||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct: 5858 acacggaaaggatctcaaatggtgctacgaaaagatcttcggctgggtcatgtgaggcgg 5917
Query: 421 ttcctgtttcctccccccataagtrtcaggtaatacaaatcaratttgcatatacattaa 480
|||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 5918 ttcctgtttcctccccccataagtatcaggtaatacaaatcaaatttgcatatacattaa 5977
Query: 481 trarragragcgaatgargactccttaatcatatccggttgatacaggttcggctgtatt 540
| | || ||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5978 taaaaagaagcgaataaagactccttaatcatatccggttgatacaggttcggctgtatt 6037
Query: 541 ctcctcgtgtcgcttagtttacatttctttcccaagtttaattcaatttcttcaacaaag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6038 ctcctcgtgtcgcttagtttacatttctttcccaagtttaattcaatttcttcaacaaag 6097
Query: 601 atttagagagtatacttgcgccgtcatcatactggctgcctttccgtttcatcaatraat 660
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 6098 atttagagagtatacttgcgccgtcatcatactggctgcctttccgtttcatcaataaat 6157
Query: 661 rtgtgtgttctctaattrattttrtgctcatratatatcggttgcacgagatggtcattc 720
| ||| |||||||||| ||||| ||||||| ||||||||||||||||||||||||||||
Sbjct: 6158 atatgtattctctaattaattttatgctcataatatatcggttgcacgagatggtcattc 6217
Query: 721 cgatggtttcagactctagttaaaagaagaagctagatgctgataatattgatttcggat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6218 cgatggtttcagactctagttaaaagaagaagctagatgctgataatattgatttcggat 6277
Query: 781 gttactgattgartattttgagctattataataatatcaacaaagaaaattttaacgtgg 840
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6278 gttactgattgaatattttgagctattataataatatcaacaaagaaaattttaacgtgg 6337
Query: 841 gttgattcttaggtttaaaaagacccatcgtatatctcaccaaatatcggtaccgtattc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6338 gttgattcttaggtttaaaaagacccatcgtatatctcaccaaatatcggtaccgtattc 6397
Query: 901 gaaggataaggactaacgacttaatctctaacttgtggtaactaaatttagtcc-ttatc 959
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 6398 gaaggataaggactaacgacttaatctctaacttgtggtaactaaatttagtcctttatc 6457
Query: 960 tacaa-ttctctatagag-attcaac-aagattgtgg-ttttatctat-magtattattc 1014
||||| |||||||||||| ||||||| |||||||||| |||||||||| ||||||||||
Sbjct: 6458 tacaatttctctatagagcattcaacaaagattgtggtttttatctatcaagtattattc 6517
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.32
Gapped
Lambda K H
1.40 0.714 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6412
Number of Sequences: 1807
Number of extensions: 6412
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 1
length of query: 1014
length of database: 10,358,551
effective HSP length: 16
effective length of query: 998
effective length of database: 10,329,639
effective search space: 10308979722
effective search space used: 10308979722
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.7 bits)
S2: 50 (101.2 bits)